Index

A

add_prefix() (in module segmentation_multiprocessing)

B

boolean_mask_to_3d_array() (in module dcm2nii_multiprocessing)

C

checkPatientFolderStructure() (in module StructFolderCheck) checkPatientFolderStructure_Alternative() (in module StructFolderCheck) convert_dicom_with_timeout() (in module dcm2nii_multiprocessing)

copy_folder_contents module correct_bias_field() (in module NiftiN4BiasFieldCorrection_multiprocessing) crop_volume() (in module NiftiMaskThresholding_multiprocessing)

D

dcm2nii_multiprocessing module delete_folder module

delete_folder() (in module delete_folder) deleteTmp_xlsx() (in module radiomics_multiprocessing)

E

extract_radiomics() (in module radiomics_multiprocessing)

F

feature_harmonization module

feature_normalization module

G

gaborFilterImg() (in module radiomics_multiprocessing)

H

harmonize_image() (in module NiftiImageHarmonization_multiprocessing)

I

image_segmentation() (in module segmentation_multiprocessing)

is_mask() (in module NiftiSpatialResampling_multiprocessing)

M

main() (in module copy_folder_contents) (in module dcm2nii_multiprocessing) (in module delete_folder) (in module feature_harmonization) (in module feature_normalization) (in module NiftiImageHarmonization_multiprocessing) (in module NiftiIntensityResampling_multiprocessing) (in module NiftiMaskThresholding_multiprocessing) (in module NiftiMergeVolumes_multiprocessing) (in module NiftiN4BiasFieldCorrection_multiprocessing) (in module NiftiSpatialResampling_multiprocessing) (in module NiftiWindowing_multiprocessing) (in module predict) (in module radiomics_multiprocessing) (in module reorganize_multiprocessing) (in module segmentation_multiprocessing) (in module StructFolderCheck) merge_volume() (in module NiftiMergeVolumes_multiprocessing)

merge_xlsx() (in module radiomics_multiprocessing) module copy_folder_contents dcm2nii_multiprocessing delete_folder feature_harmonization feature_normalization NiftiImageHarmonization_multiprocessing NiftiIntensityResampling_multiprocessing NiftiMaskThresholding_multiprocessing NiftiMergeVolumes_multiprocessing NiftiN4BiasFieldCorrection_multiprocessing NiftiSpatialResampling_multiprocessing NiftiWindowing_multiprocessing predict radiomics_multiprocessing reorganize_multiprocessing segmentation_multiprocessing StructFolderCheck

N

NiftiImageHarmonization_multiprocessing module NiftiIntensityResampling_multiprocessing module NiftiMaskThresholding_multiprocessing module NiftiMergeVolumes_multiprocessing module

NiftiN4BiasFieldCorrection_multiprocessing module NiftiSpatialResampling_multiprocessing module NiftiWindowing_multiprocessing module

O

ordinal_suffix() (in module NiftiIntensityResampling_multiprocessing)

P

parse() (in module radiomics_multiprocessing) perform_normalization() (in module feature_normalization) predict module

process_patient() (in module dcm2nii_multiprocessing) (in module NiftiSpatialResampling_multiprocessing)

R

radiomics_multiprocessing module radiomics_statistics() (in module radiomics_multiprocessing) read_config_file() (in module radiomics_multiprocessing) remove_finished_jobs() (in module segmentation_multiprocessing)

reorganize() (in module reorganize_multiprocessing) reorganize_multiprocessing module resample_image_sitk() (in module NiftiSpatialResampling_multiprocessing) resampling() (in module NiftiIntensityResampling_multiprocessing) rtstruct_with_timeout() (in module dcm2nii_multiprocessing)

S

segmentation_multiprocessing module

StructFolderCheck module

W

windowing() (in module NiftiWindowing_multiprocessing)

windows_preset() (in module NiftiWindowing_multiprocessing)